library(vegan) Ityphilus_sp6 = c(0, 0, 0, 0, 0, 1, 0) Schendylops_sp1 = c(0, 0, 1, 0, 0, 0, 0) Schendylops_sp3 = c(0, 0, 0, 0, 0, 0, 1) Lamyctes_sp = c(0, 0, 1, 0, 0, 0, 0) Scolopendra_viridicornis = c(0, 0, 0, 1, 0, 0, 0) Sphendononema_guildingii = c(0, 0, 1, 1, 1, 0, 1) Polydesmida_sp1 = c(0, 0, 0, 0, 0, 1, 1) Polydesmida_sp3 = c(0, 0, 0, 1, 0, 0, 0) Pseudonannolene_imbirenses = c(0, 0, 1, 0, 1, 0, 0) Pseudonannolenidae_sp = c(1, 0, 1, 0, 0, 0, 0) Pseudonannolenidae_sp2 = c(0, 0, 0, 1, 1, 0, 0) Pseudonannolenidae_sp3 = c(0, 0, 0, 1, 0, 1, 1) Pseudonannolenidae_sp4 = c(0, 0, 0, 1, 1, 0, 0) Pseudonannolenidae_sp5 = c(0, 1, 0, 0, 1, 0, 1) Pseudonannolenidae_sp6 = c(0, 0, 0, 1, 0, 0, 1) Pseudonannolenidae_sp7 = c(0, 0, 0, 0, 0, 0, 1) Spirostreptidae_sp12 = c(0, 0, 1, 0, 0, 1, 1) Siphonophorida_sp1 = c(0, 0, 0, 1, 0, 0, 0) Blattaria_sp1 = c(1, 0, 1, 0, 1, 1, 1) Blattaria_sp2 = c(0, 1, 1, 1, 1, 0, 0) Blattaria_sp3 = c(0, 0, 1, 0, 0, 0, 0) Blattaria_sp5 = c(0, 0, 1, 0, 0, 0, 0) Blableridae_sp1 = c(0, 0, 1, 0, 0, 0, 0) Blattellidae_sp1 = c(0, 1, 1, 1, 0, 0, 1) Blattellidae_sp2 = c(0, 0, 1, 0, 0, 0, 0) Blattellidae_sp3 = c(0, 0, 1, 0, 0, 0, 0) Polyphagidae_sp1 = c(0, 0, 1, 0, 0, 0, 0) Coleoptera_indet = c(0, 0, 1, 0, 0, 0, 1) Coleoptera_sp1 = c(0, 0, 1, 0, 0, 0, 1) Coleoptera_sp2 = c(0, 0, 1, 0, 0, 0, 0) Coleoptera_sp3 = c(0, 0, 0, 0, 1, 0, 0) Coleoptera_sp4 = c(0, 0, 0, 0, 1, 0, 1) Coleoptera_sp5 = c(0, 1, 1, 0, 0, 0, 0) Coleoptera_sp6 = c(0, 0, 1, 0, 0, 0, 0) Coleoptera_sp7 = c(0, 0, 1, 0, 0, 0, 0) Coleoptera_sp8 = c(0, 0, 1, 0, 0, 0, 0) Coleoptera_sp9 = c(0, 0, 0, 1, 0, 0, 0) Coleoptera_sp10 = c(0, 0, 1, 0, 0, 0, 0) Coleoptera_sp11 = c(0, 0, 1, 0, 0, 0, 0) Coleoptera_sp12 = c(0, 0, 1, 0, 0, 0, 0) Coleoptera_sp13 = c(0, 0, 0, 0, 0, 0, 1) Coleoptera_sp14 = c(0, 0, 0, 0, 0, 0, 1) Coleoptera_sp15 = c(0, 0, 0, 0, 0, 0, 1) Coleoptera_sp16 = c(0, 0, 0, 0, 0, 0, 1) Coleoptera_sp17 = c(0, 0, 0, 0, 0, 0, 1) Coleoptera_sp18 = c(0, 0, 0, 0, 0, 0, 1) Coleoptera_sp20 = c(0, 0, 0, 0, 0, 1, 0) Cantharidae_sp1 = c(0, 0, 1, 0, 0, 0, 0) Cantharidae_sp2 = c(0, 0, 1, 0, 0, 0, 0) Cantharidae_sp3 = c(0, 0, 1, 0, 0, 0, 0) Carabidae_indet1 = c(1, 0, 0, 0, 0, 0, 0) Pentagonica_sp1 = c(0, 0, 1, 0, 0, 1, 1) Platynus_sp1 = c(0, 0, 1, 0, 0, 0, 0) Pterostichini_sp2 = c(0, 0, 0, 0, 0, 0, 1) Agonina_sp1 = c(0, 0, 1, 0, 0, 1, 1) Agonina_sp2 = c(0, 0, 1, 0, 0, 0, 0) Loxandrus_sp1 = c(0, 0, 1, 0, 0, 0, 0) Paratachys_sp1 = c(0, 0, 1, 1, 0, 0, 1) Paratachys_sp2 = c(0, 0, 1, 0, 0, 0, 1) Pericompsus_sp1 = c(0, 0, 1, 0, 0, 1, 1) Polyderis_sp1 = c(0, 0, 1, 0, 0, 0, 1) Tachys_sp1 = c(0, 0, 1, 0, 0, 0, 1) Carabidae_sp1 = c(0, 0, 1, 0, 0, 0, 0) Carabidae_sp2 = c(1, 0, 0, 0, 0, 0, 0) Carabidae_sp3 = c(1, 0, 0, 0, 0, 0, 0) Zuphiini_sp2 = c(1, 0, 0, 0, 0, 1, 0) Chrysomelidae_sp1 = c(1, 0, 0, 0, 0, 0, 0) Chrysomelidae_sp3 = c(0, 0, 1, 0, 0, 0, 0) Chrysomelidae_sp4 = c(0, 0, 1, 0, 0, 0, 1) Curculionidae_sp1 = c(1, 0, 1, 0, 0, 0, 0) Curculionidae_sp2 = c(0, 0, 0, 0, 0, 0, 1) Dytiscidae_sp1 = c(0, 0, 1, 0, 0, 0, 0) Dryopidae_sp1 = c(1, 0, 1, 0, 0, 0, 0) Dryopidae_sp2 = c(1, 0, 0, 0, 0, 0, 0) Macrelmis_sp1 = c(0, 0, 1, 0, 0, 0, 0) Macrelmis_sp2 = c(0, 0, 1, 0, 0, 0, 0) Hexacylloepus_sp = c(0, 0, 1, 0, 0, 0, 0) Lampyridae_larva_indet = c(0, 0, 1, 1, 1, 0, 0) Ptilodactylidae_sp2 = c(0, 0, 1, 1, 0, 0, 1) Canthon_sp = c(0, 0, 0, 0, 0, 0, 1) Atheucus_sp = c(1, 0, 0, 0, 0, 0, 0) Scarabaeidae_sp2 = c(0, 0, 1, 0, 0, 0, 0) Scydmaenidae_sp1 = c(0, 0, 0, 0, 0, 0, 1) Aleocharinae_sp = c(0, 0, 1, 0, 0, 0, 1) Holotrochus_sp2 = c(0, 0, 1, 0, 0, 0, 0) Oxytelinae_sp = c(0, 0, 1, 0, 0, 0, 0) Oxytelinae_sp1 = c(0, 0, 1, 0, 0, 0, 1) Oxytelinae_sp2 = c(0, 0, 1, 1, 0, 0, 0) Paederinae_sp4 = c(0, 0, 0, 0, 0, 0, 1) Paederinae_sp5 = c(0, 0, 1, 0, 0, 0, 1) Homeotarsus_sp9 = c(0, 0, 0, 1, 0, 0, 0) Pselaphinae_sp1 = c(0, 0, 0, 1, 1, 0, 0) Staphylinini_sp1 = c(0, 0, 1, 0, 0, 0, 0) Staphylinini_sp2 = c(0, 0, 0, 0, 0, 0, 1) Xantholinini_sp7 = c(0, 0, 1, 0, 0, 0, 0) Stenus_sp1 = c(0, 0, 1, 0, 0, 0, 0) Stenus_sp2 = c(0, 0, 0, 0, 0, 1, 0) Tachyporinae_sp1 = c(0, 0, 0, 0, 0, 0, 1) Tachyporinae_sp2 = c(0, 0, 1, 0, 0, 0, 0) Tachyporinae_sp3 = c(0, 0, 1, 0, 0, 0, 0) Staphylinidae_sp = c(1, 0, 1, 0, 0, 0, 1) Staphylinidae_sp4 = c(0, 0, 1, 0, 0, 0, 1) Staphylinidae_sp8 = c(0, 0, 0, 0, 1, 0, 1) Staphylinidae_sp13 = c(0, 0, 1, 1, 1, 0, 1) Staphylinidae_sp14 = c(0, 0, 0, 0, 1, 0, 0) Staphylinidae_sp15 = c(0, 0, 1, 0, 0, 0, 0) Staphylinidae_sp16 = c(0, 0, 1, 0, 0, 0, 0) Staphylinidae_sp18 = c(0, 0, 1, 0, 0, 0, 1) Staphylinidae_sp19 = c(0, 0, 0, 0, 0, 0, 1) Staphylinidae_sp20 = c(0, 0, 0, 0, 0, 1, 1) Staphylinidae_sp21 = c(0, 0, 0, 0, 0, 0, 1) Tenebrionidae_sp1 = c(0, 1, 0, 0, 0, 1, 0) Diptera_indet = c(0, 0, 1, 0, 0, 0, 0) Diptera_sp1 = c(0, 0, 1, 0, 0, 0, 0) Diptera_sp2 = c(0, 1, 1, 0, 0, 0, 0) Diptera_sp3 = c(0, 1, 1, 0, 0, 0, 0) Diptera_sp4 = c(0, 0, 0, 1, 0, 0, 0) Diptera_sp5 = c(0, 0, 0, 1, 0, 0, 0) Diptera_sp6 = c(0, 0, 1, 1, 0, 0, 0) Diptera_sp7 = c(0, 0, 1, 0, 0, 0, 0) Diptera_sp9 = c(0, 0, 1, 0, 0, 0, 0) Acalyptratae_sp3 = c(0, 0, 1, 0, 0, 0, 0) Cecidomyiidae_sp1 = c(0, 1, 1, 0, 1, 0, 0) Cecidomyiidae_sp2 = c(0, 1, 0, 0, 1, 0, 1) Cecidomyiidae_sp3 = c(0, 0, 1, 0, 0, 0, 0) Ceratoponidae_sp1 = c(0, 0, 1, 0, 0, 1, 0) Ceratoponidae_sp3 = c(0, 0, 1, 0, 0, 0, 0) Chironomidae_sp1 = c(0, 0, 1, 0, 0, 0, 0) Chironomidae_sp2 = c(0, 0, 1, 0, 0, 0, 0) Chironomidae_sp3 = c(0, 0, 1, 0, 0, 0, 1) Chironomidae_sp4 = c(0, 0, 1, 0, 0, 0, 0) Chironomidae_sp5 = c(0, 0, 1, 0, 0, 0, 0) Culicidae_sp2 = c(0, 0, 0, 0, 0, 0, 1) Drosophila_sp1 = c(1, 1, 0, 0, 0, 0, 1) Drosophila_sp2 = c(0, 0, 1, 0, 0, 0, 0) Mycetophilidae_sp1 = c(0, 1, 0, 0, 0, 0, 0) Mycetophilidae_sp2 = c(0, 0, 1, 0, 0, 0, 0) Mycetophilidae_sp3 = c(0, 0, 1, 0, 0, 0, 0) Muscidae_sp1 = c(0, 0, 1, 0, 0, 0, 0) Phoridae_sp1 = c(0, 0, 0, 0, 0, 1, 0) Phoridae_sp2 = c(0, 0, 0, 0, 0, 0, 1) Phoridae_sp4 = c(0, 0, 1, 0, 0, 0, 0) Psychodidae_sp2 = c(0, 0, 1, 0, 0, 0, 0) Phlebotominae_sp1 = c(0, 0, 1, 0, 0, 0, 0) Sciaridae_sp1 = c(0, 0, 1, 0, 0, 0, 0) Sciaridae_sp2 = c(0, 0, 1, 0, 0, 0, 0) Sciaridae_sp3 = c(0, 0, 1, 0, 0, 0, 1) Sciaridae_sp4 = c(0, 0, 1, 0, 0, 0, 0) Leptophlebidae_sp= c(0, 0, 1, 0, 0, 1, 0) Leptophlebidae_sp1 = c(0, 1, 0, 0, 0, 0, 0) Miroculis_sp= c(0, 0, 1, 0, 0, 0, 0) Ephemeroptera_indet = c(1, 0, 0, 0, 0, 0, 0) Hemiptera_sp2 = c(0, 0, 1, 0, 0, 0, 0) Hemiptera_sp3 = c(0, 0, 1, 1, 0, 0, 0) Hemiptera_sp4 = c(0, 0, 1, 1, 0, 0, 0) Cicadellidae_sp1 = c(0, 0, 1, 0, 0, 0, 0) Cicadellidae_sp2 = c(0, 0, 1, 0, 0, 0, 0) Cixiidae_sp1 = c(0, 0, 1, 0, 0, 0, 0) Zicca_sp= c(0, 0, 1, 0, 0, 0, 0) Gelastocoridae_sp1 = c(0, 0, 1, 0, 0, 0, 1) Gelastocoridae_sp2 = c(0, 0, 1, 0, 0, 0, 0) Hydrometridae_sp= c(0, 0, 0, 0, 0, 0, 1) Lygaeidae_sp= c(0, 0, 1, 0, 0, 0, 1) Lygaeidae_sp1 = c(0, 0, 0, 0, 0, 0, 1) Lygaeidae_sp2 = c(0, 0, 0, 0, 0, 0, 1) Lygaeidae_sp3 = c(0, 0, 0, 0, 0, 0, 1) Notonectidae_sp= c(0, 0, 0, 1, 0, 0, 0) Reduviidae_sp1 = c(0, 0, 1, 0, 0, 0, 0) Reduviidae_sp2 = c(0, 1, 1, 1, 0, 0, 0) Reduviidae_sp4 = c(0, 0, 0, 0, 1, 0, 0) Reduviidae_sp5 = c(0, 0, 1, 0, 0, 0, 0) Zelurus_sp= c(0, 0, 1, 1, 0, 0, 1) Emesinae_sp1 = c(0, 0, 1, 0, 0, 0, 0) Emesinae_sp2 = c(0, 0, 1, 0, 0, 0, 1) Emesinae_sp3 = c(0, 0, 1, 0, 0, 0, 0) Harpactocorinae_indet = c(0, 0, 1, 0, 0, 0, 0) Veliidae_sp1 = c(0, 0, 1, 0, 0, 0, 0) Hymenoptera_sp2 = c(0, 0, 1, 0, 0, 0, 0) Hymenoptera_sp3 = c(0, 0, 1, 0, 0, 0, 0) Hymenoptera_sp4 = c(0, 0, 1, 0, 0, 0, 0) Hymenoptera_sp5 = c(0, 0, 1, 0, 0, 0, 0) Hymenoptera_sp6 = c(0, 0, 1, 0, 0, 0, 0) Hymenoptera_sp8 = c(0, 0, 1, 0, 0, 0, 0) Hymenoptera_sp12 = c(0, 0, 1, 0, 0, 0, 0) Formicidae_sp4 = c(0, 0, 1, 0, 0, 0, 1) Formicidae_sp5 = c(0, 0, 1, 0, 0, 0, 0) Formicidae_sp6 = c(0, 0, 1, 0, 0, 0, 0) Formicidae_sp9 = c(0, 0, 1, 0, 0, 0, 1) Formicidae_sp10 = c(0, 0, 1, 0, 0, 0, 0) Formicidae_sp11 = c(0, 0, 1, 0, 0, 0, 0) Formicidae_sp13 = c(0, 0, 1, 0, 0, 0, 0) Formicidae_sp14 = c(0, 0, 0, 0, 0, 0, 1) Ichneumonoidea_sp1 = c(0, 0, 1, 0, 0, 0, 0) Vespidae_sp1 = c(0, 0, 1, 0, 0, 0, 0) Nasutitermitinae_sp1 = c(0, 0, 1, 0, 0, 0, 1) Noctuidae_sp1 = c(0, 0, 1, 0, 0, 0, 0) Tineidae_sp1 = c(0, 1, 1, 0, 0, 0, 1) Megaloptera_larva_indet = c(0, 0, 0, 1, 0, 0, 0) Myrmeleontidae_sp1 = c(0, 0, 1, 0, 0, 0, 0) Odonata_jovem_indet = c(0, 0, 0, 0, 0, 0, 1) Orthoptera_sp1 = c(0, 0, 1, 0, 0, 1, 0) Phalangopsidae_sp1 = c(0, 0, 1, 1, 1, 0, 0) Phalangopsidae_sp2 = c(0, 0, 1, 0, 1, 0, 0) Endecous_sp= c(0, 1, 0, 1, 0, 0, 1) Endecous_sp1 = c(1, 0, 1, 0, 0, 0, 0) Endecous_spn= c(0, 0, 1, 0, 0, 0, 0) Eidmanacris_sp= c(0, 0, 1, 0, 0, 0, 0) Cyrtoxipha_sp= c(0, 0, 0, 1, 0, 0, 0) Perlidae_sp1 = c(0, 0, 0, 1, 0, 1, 0) Perlidae_sp2 = c(0, 0, 1, 0, 0, 0, 0) Perlodidae_sp= c(0, 0, 1, 0, 0, 0, 0) Psocoptera_indet = c(0, 0, 1, 0, 0, 0, 0) Psocoptera_sp1 = c(0, 0, 1, 0, 0, 0, 0) Psocoptera_sp2 = c(0, 0, 1, 0, 0, 0, 0) Psocoptera_sp3= c(0, 0, 1, 0, 0, 0, 0) Lepismatidae_sp1 = c(0, 0, 1, 0, 0, 0, 1) Lepismatidae_sp2 = c(0, 0, 1, 0, 0, 0, 1) Lepismatidae_sp3 = c(0, 0, 1, 0, 0, 0, 0) Trichoptera_sp1 = c(0, 0, 1, 0, 0, 0, 1) Trichoptera_sp2 = c(0, 0, 1, 0, 0, 0, 0) Trichoptera_sp3 = c(0, 1, 1, 0, 0, 0, 1) Hydrobiosidae_sp1_larva = c(0, 0, 1, 0, 0, 0, 0) Hydroptilidae_sp1_larva = c(0, 0, 1, 0, 0, 0, 0) Hydroptilidae_sp2_larva = c(0, 0, 1, 0, 0, 0, 0) Hydropsychidae_sp1_larva = c(0, 0, 1, 0, 0, 0, 0) Armadillidae_sp34 = c(0, 0, 1, 1, 0, 0, 0) Dubioniscidae_sp36 = c(0, 1, 0, 0, 0, 0, 0) Dubioniscidae_sp42 = c(0, 0, 0, 0, 0, 1, 1) Dubioniscidae_sp43 = c(0, 0, 1, 0, 0, 1, 1) Platyarthridae_sp37 = c(0, 0, 1, 0, 0, 0, 1) Styloniscidae_sp35 = c(0, 0, 1, 0, 0, 0, 0) community=rbind(Ityphilus_sp6, Schendylops_sp1, Schendylops_sp3, Lamyctes_sp, Scolopendra_viridicornis, Sphendononema_guildingii, Polydesmida_sp1, Polydesmida_sp3, Pseudonannolene_imbirenses, Pseudonannolenidae_sp, Pseudonannolenidae_sp2, Pseudonannolenidae_sp3, Pseudonannolenidae_sp4, Pseudonannolenidae_sp5, Pseudonannolenidae_sp6, Pseudonannolenidae_sp7, Spirostreptidae_sp12, Siphonophorida_sp1, Blattaria_sp1, Blattaria_sp2, Blattaria_sp3, Blattaria_sp5, Blableridae_sp1, Blattellidae_sp1, Blattellidae_sp2, Blattellidae_sp3, Polyphagidae_sp1, Coleoptera_indet, Coleoptera_sp1, Coleoptera_sp2, Coleoptera_sp3, Coleoptera_sp4, Coleoptera_sp5, Coleoptera_sp6, Coleoptera_sp7, Coleoptera_sp8, Coleoptera_sp9, Coleoptera_sp10, Coleoptera_sp11, Coleoptera_sp12, Coleoptera_sp13, Coleoptera_sp14, Coleoptera_sp15, Coleoptera_sp16, Coleoptera_sp17, Coleoptera_sp18, Coleoptera_sp20, Cantharidae_sp1, Cantharidae_sp2, Cantharidae_sp3, Carabidae_indet1, Pentagonica_sp1, Platynus_sp1, Pterostichini_sp2, Agonina_sp1, Agonina_sp2, Loxandrus_sp1, Paratachys_sp1, Paratachys_sp2, Pericompsus_sp1, Polyderis_sp1, Tachys_sp1, Carabidae_sp1, Carabidae_sp2, Carabidae_sp3, Zuphiini_sp2, Chrysomelidae_sp1, Chrysomelidae_sp3, Chrysomelidae_sp4, Curculionidae_sp1, Curculionidae_sp2, Dytiscidae_sp1, Dryopidae_sp1, Dryopidae_sp2, Macrelmis_sp1, Macrelmis_sp2, Hexacylloepus_sp, Lampyridae_larva_indet, Ptilodactylidae_sp2, Canthon_sp, Atheucus_sp, Scarabaeidae_sp2, Scydmaenidae_sp1, Aleocharinae_sp, Holotrochus_sp2, Oxytelinae_sp, Oxytelinae_sp1, Oxytelinae_sp2, Paederinae_sp4, Paederinae_sp5, Homeotarsus_sp9, Pselaphinae_sp1, Staphylinini_sp1, Staphylinini_sp2, Xantholinini_sp7, Stenus_sp1, Stenus_sp2, Tachyporinae_sp1, Tachyporinae_sp2, Tachyporinae_sp3, Staphylinidae_sp, Staphylinidae_sp4, Staphylinidae_sp8, Staphylinidae_sp13, Staphylinidae_sp14, Staphylinidae_sp15, Staphylinidae_sp16, Staphylinidae_sp18, Staphylinidae_sp19, Staphylinidae_sp20, Staphylinidae_sp21, Tenebrionidae_sp1, Diptera_indet, Diptera_sp1, Diptera_sp2, Diptera_sp3, Diptera_sp4, Diptera_sp5, Diptera_sp6, Diptera_sp7, Diptera_sp9, Acalyptratae_sp3, Cecidomyiidae_sp1, Cecidomyiidae_sp2, Cecidomyiidae_sp3, Ceratoponidae_sp1, Ceratoponidae_sp3, Chironomidae_sp1, Chironomidae_sp2, Chironomidae_sp3, Chironomidae_sp4, Chironomidae_sp5, Culicidae_sp2, Drosophila_sp1, Drosophila_sp2, Mycetophilidae_sp1, Mycetophilidae_sp2, Mycetophilidae_sp3, Muscidae_sp1, Phoridae_sp1, Phoridae_sp2, Phoridae_sp4, Psychodidae_sp2, Phlebotominae_sp1, Sciaridae_sp1, Sciaridae_sp2, Sciaridae_sp3, Sciaridae_sp4, Leptophlebidae_sp, Leptophlebidae_sp1, Miroculis_sp, Ephemeroptera_indet, Hemiptera_sp2, Hemiptera_sp3, Hemiptera_sp4, Cicadellidae_sp1, Cicadellidae_sp2, Cixiidae_sp1, Zicca_sp, Gelastocoridae_sp1, Gelastocoridae_sp2, Hydrometridae_sp, Lygaeidae_sp, Lygaeidae_sp1, Lygaeidae_sp2, Lygaeidae_sp3, Notonectidae_sp, Reduviidae_sp1, Reduviidae_sp2, Reduviidae_sp4, Reduviidae_sp5, Zelurus_sp, Emesinae_sp1, Emesinae_sp2, Emesinae_sp3, Harpactocorinae_indet, Veliidae_sp1, Hymenoptera_sp2, Hymenoptera_sp3, Hymenoptera_sp4, Hymenoptera_sp5, Hymenoptera_sp6, Hymenoptera_sp8, Hymenoptera_sp12, Formicidae_sp4, Formicidae_sp5, Formicidae_sp6, Formicidae_sp9, Formicidae_sp10, Formicidae_sp11, Formicidae_sp13, Formicidae_sp14, Ichneumonoidea_sp1, Vespidae_sp1, Nasutitermitinae_sp1, Noctuidae_sp1, Tineidae_sp1, Megaloptera_larva_indet, Myrmeleontidae_sp1, Odonata_jovem_indet, Orthoptera_sp1, Phalangopsidae_sp1, Phalangopsidae_sp2, Endecous_sp, Endecous_sp1, Endecous_sp, Eidmanacris_sp, Cyrtoxipha_sp, Perlidae_sp1, Perlidae_sp2, Perlodidae_sp, Psocoptera_indet, Psocoptera_sp1, Psocoptera_sp2, Psocoptera_sp3, Lepismatidae_sp1, Lepismatidae_sp2, Lepismatidae_sp3, Trichoptera_sp1, Trichoptera_sp2, Trichoptera_sp3, Hydrobiosidae_sp1_larva, Hydroptilidae_sp1_larva, Hydroptilidae_sp2_larva, Hydropsychidae_sp1_larva, Armadillidae_sp34, Dubioniscidae_sp36, Dubioniscidae_sp42, Dubioniscidae_sp43, Platyarthridae_sp37, Styloniscidae_sp35) colnames(community)=c("Passa_Tres", "S.Bernardo", "Angelica", "Bezerra", "S.Mateus", "T.Ronca_I", "T.Ronca_II") beals = beals(community, reference = community, type = 0, include = FALSE) presences = which(community == 1) beals.presences = beals[presences] beals.presences= as.matrix(beals.presences) length(beals.presences) # N=341 absences = which(community == 0) beals.absences = beals[absences] beals.absences= as.matrix(beals.absences) length(beals.absences) # N=1276 beals.presences=as.numeric(beals.presences) pres= beals.presences h=hist(pres) h$counts= cumsum(h$counts)/341 beals.absences=as.numeric(beals.absences) abs= beals.absences i=hist(abs) i$counts= cumsum(i$counts)/1276 rank.abs = rank (c(beals.absences, beals.presences)) summary(rank.abs)# threshold= median (809.5) threshold=beals.absences[809.5]# threshold isopoda= beals[c("Armadillidae_sp34", "Dubioniscidae_sp36", "Dubioniscidae_sp42", "Dubioniscidae_sp43", "Platyarthridae_sp37", "Styloniscidae_sp35"),] comm.isopoda=community[c("Armadillidae_sp34", "Dubioniscidae_sp36", "Dubioniscidae_sp42", "Dubioniscidae_sp43", "Platyarthridae_sp37", "Styloniscidae_sp35"),] dark.div = ifelse(isopoda>threshold & comm.isopoda==0,TRUE,FALSE)